scFates.tl.unroll_circle¶
- scFates.tl.unroll_circle(adata, copy=False)¶
Unroll circle to get full spectrum of pseudotime values along it.
- Parameters
- Returns
adata – if copy=True it returns or else update fields to adata:
- .obs[‘t’]
assigned pseudotime value.
- .obs[‘seg’]
assigned segment of the tree.
- .obs[‘milestone’]
assigned region surrounding forks and tips.
- .uns[‘graph’][‘pp_seg’]
segments network information.
- .uns[‘graph’][‘pp_info’]
for each PP, its distance vs root and segment assignment.
- Return type