scFates.pl.binned_pseudotime_meta¶
- scFates.pl.binned_pseudotime_meta(adata, key, nbins=20, rotation=0, show_colorbar=False, rev=False, cmap='viridis', ax=None, show=None, save=None)¶
Plot a dot plot of proportion of cells from a given category over binned sections of pseudotime.
- Parameters
- adata
Annotated data matrix.
- key
category to study.
- nbins :
int(default:20) Number of pseudotime bin to generate.
- rotation :
int(default:0) rotaton of the category labels.
- show_colorbar :
bool(default:False) display pseudotime colorbar.
- cmap
colormap of the pseudotime cbar.
- show :
bool|NoneOptional[bool] (default:None) show the plot.
- save :
str|bool|NoneUnion[str,bool,None] (default:None) save the plot.
- Returns
- Return type
If show==False a tuple of
Axes