scFates.pl.milestones

scFates.pl.milestones(adata, basis=None, annotate=False, title='milestones', subset=None, ax=None, show=None, save=None, **kwargs)

Display the milestone graph in PAGA style.

Parameters:

adata

Annotated data matrix.

basis Optional[str] (default: None)

Reduction to use for plotting.

annotate bool (default: False)

Display milestone labels on the plot.

title str (default: 'milestones')

Plot title to display.

subset Optional[Iterable] (default: None)

Subset cells.

ax default: None

Add plot to existing ax.

show Optional[bool] (default: None)

show the plot.

save Union[str, bool, None] (default: None)

save the plot.

kwargs

arguments to pass to matplotlib.pyplot.scatter().

Returns:

If show==False an object of Axes