scFates.pl.trajectory_3d¶
- scFates.pl.trajectory_3d(adata, basis='umap3d', color=None, traj_width=5, cell_size=2, figsize=(900, 900), cmap=None)¶
Project trajectory onto 3d embedding.
- Parameters
- adata :
AnnData Annotated data matrix.
- basis :
str(default:'umap3d') Name of the obsm basis to use.
- color :
str|NoneOptional[str] (default:None) cells color.
- traj_width :
int(default:5) segments width.
- cell_size :
int(default:2) cell size.
- figsize :
tuple(default:(900, 900)) figure size in pixels.
- cmap
colormap of the cells.
- adata :
- Returns
- Return type
an interactive plotly graph figure.