scFates.pl.linearity_deviation¶
- scFates.pl.linearity_deviation(adata, start_milestone, end_milestone, ntop_genes=30, fontsize=8, show=None, save=None)¶
Plot the results generated by tl.linearity_deviation.
- Parameters
- adata :
AnnData Annotated data matrix.
- start_milestone
tip defining the starting point of analysed segment.
- end_milestone
tip defining the end point of analysed segment.
- ntop_genes :
int(default:30) number of top genes to show.
- fontsize :
int(default:8) Fontsize for gene names.
- show :
bool|NoneOptional[bool] (default:None) show the plot.
- save :
str|bool|NoneUnion[str,bool,None] (default:None) save the plot.
- adata :
- Returns
- Return type
If show==False a matrix of
Axes