scFates.get.fork_stats¶
- scFates.get.fork_stats(adata, root_milestone, milestones, module=None, branch=None)¶
Extract statistics from the fork analysis.
- Parameters
- adata :
AnnData Annotated data matrix.
- root_milestone :
str tip defining progenitor branch.
- milestones :
Iterable tips defining the progenies branches.
- module :
str|NoneOptional[str] (default:None) subset features to a specific module.
- branch :
str|NoneOptional[str] (default:None) subset features to a specific milestone.
- adata :
- Returns
- Return type
a
pandas.DataFrameextracted from adata.uns.