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scFates
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Index
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Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
L
|
M
|
P
|
R
|
S
|
T
|
U
A
activation() (in module scFates.tl)
activation_lm() (in module scFates.tl)
attach_tree() (in module scFates.tl)
B
batch_correct() (in module scFates.pp)
binned_pseudotime_meta() (in module scFates.pl)
branch_specific() (in module scFates.tl)
C
cellrank_to_tree() (in module scFates.tl)
circle() (in module scFates.tl)
cleanup() (in module scFates.tl)
cluster() (in module scFates.tl)
convert_to_soft() (in module scFates.tl)
curve() (in module scFates.tl)
D
dendrogram() (in module scFates.pl)
(in module scFates.tl)
diffusion() (in module scFates.pp)
E
explore_sigma() (in module scFates.tl)
F
filter_cells() (in module scFates.pp)
find_overdispersed() (in module scFates.pp)
fit() (in module scFates.tl)
fork_stats() (in module scFates.get)
G
graph() (in module scFates.pl)
L
linearity_deviation() (in module scFates.pl)
(in module scFates.tl)
M
matrix() (in module scFates.pl)
milestones() (in module scFates.pl)
module
scFates
module_inclusion() (in module scFates.pl)
(in module scFates.tl)
modules() (in module scFates.get)
(in module scFates.pl)
P
pseudotime() (in module scFates.tl)
R
root() (in module scFates.tl)
roots() (in module scFates.tl)
S
scFates
module
simplify() (in module scFates.tl)
single_trend() (in module scFates.pl)
slide_cells() (in module scFates.tl)
slide_cors() (in module scFates.get)
(in module scFates.pl)
(in module scFates.tl)
subset_tree() (in module scFates.tl)
synchro_path() (in module scFates.pl)
(in module scFates.tl)
synchro_path_multi() (in module scFates.tl)
T
test_association() (in module scFates.pl)
(in module scFates.tl)
test_association_covariate() (in module scFates.tl)
test_association_monocle3() (in module scFates.tl)
test_covariate() (in module scFates.tl)
test_fork() (in module scFates.pl)
(in module scFates.tl)
trajectory() (in module scFates.pl)
trajectory_3d() (in module scFates.pl)
tree() (in module scFates.tl)
trends() (in module scFates.pl)
U
unroll_circle() (in module scFates.tl)
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