Index A | B | C | D | E | F | G | L | M | P | R | S | T | U A activation() (in module scFates.tl) activation_lm() (in module scFates.tl) attach_tree() (in module scFates.tl) B batch_correct() (in module scFates.pp) binned_pseudotime_meta() (in module scFates.pl) branch_specific() (in module scFates.tl) C cellrank_to_tree() (in module scFates.tl) circle() (in module scFates.tl) cleanup() (in module scFates.tl) cluster() (in module scFates.tl) convert_to_soft() (in module scFates.tl) curve() (in module scFates.tl) D dendrogram() (in module scFates.pl) (in module scFates.tl) diffusion() (in module scFates.pp) E explore_sigma() (in module scFates.tl) F filter_cells() (in module scFates.pp) find_overdispersed() (in module scFates.pp) fit() (in module scFates.tl) fork_stats() (in module scFates.get) G graph() (in module scFates.pl) L linearity_deviation() (in module scFates.pl) (in module scFates.tl) M matrix() (in module scFates.pl) milestones() (in module scFates.pl) module scFates module_inclusion() (in module scFates.pl) (in module scFates.tl) modules() (in module scFates.get) (in module scFates.pl) P pseudotime() (in module scFates.tl) R root() (in module scFates.tl) roots() (in module scFates.tl) S scFates module simplify() (in module scFates.tl) single_trend() (in module scFates.pl) slide_cells() (in module scFates.tl) slide_cors() (in module scFates.get) (in module scFates.pl) (in module scFates.tl) subset_tree() (in module scFates.tl) synchro_path() (in module scFates.pl) (in module scFates.tl) synchro_path_multi() (in module scFates.tl) T test_association() (in module scFates.pl) (in module scFates.tl) test_association_covariate() (in module scFates.tl) test_association_monocle3() (in module scFates.tl) test_covariate() (in module scFates.tl) test_fork() (in module scFates.pl) (in module scFates.tl) trajectory() (in module scFates.pl) trajectory_3d() (in module scFates.pl) tree() (in module scFates.tl) trends() (in module scFates.pl) U unroll_circle() (in module scFates.tl)
